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    LOC103482887 ethylene-responsive transcription factor ERF096-like [ Cucumis melo (muskmelon) ]

    Gene ID: 103482887, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103482887
    Gene description
    ethylene-responsive transcription factor ERF096-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103482887 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 9 NC_066865.1 (24471727..24472587, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546272.1 (7952497..7953356, complement)

    Chromosome 9 - NC_066865.1Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 1-like Neighboring gene uncharacterized LOC103482885 Neighboring gene probable cinnamyl alcohol dehydrogenase 1 Neighboring gene uncharacterized LOC103482888 Neighboring gene RING-H2 finger protein ATL79-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor ERF096-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066865.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      24471727..24472587 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008439255.2 → XP_008437477.1  ethylene-responsive transcription factor ERF096-like

      UniProtKB/TrEMBL
      A0A1S3AUP5, A0A5A7TLM2
      Conserved Domains (1) summary
      smart00380
      Location:17 → 80
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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