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    p3h2 prolyl 3-hydroxylase 2 [ Cynoglossus semilaevis (tongue sole) ]

    Gene ID: 103392998, updated on 11-Mar-2024

    Summary

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    Gene symbol
    p3h2
    Gene description
    prolyl 3-hydroxylase 2
    See related
    Ensembl:ENSCSEG00000013736
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cynoglossus semilaevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
    Also known as
    leprel1
    Orthologs
    human zebrafish all
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    Genomic context

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    See p3h2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current Cse_v1.0 (GCF_000523025.1) 2 NC_024308.1 (1373888..1410896)

    Chromosome 2 - NC_024308.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 50a Neighboring gene claudin-7-like Neighboring gene coiled-coil domain containing 181 Neighboring gene coproporphyrinogen oxidase Neighboring gene proline rich Gla (G-carboxyglutamic acid) 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_024308.1 Chromosome 2 Reference Cse_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen-proline 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in collagen metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prolyl 3-hydroxylase 2
    Names
    leprecan-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cse_v1.0 Primary Assembly

    Genomic

    1. NC_024308.1 Reference Cse_v1.0 Primary Assembly

      Range
      1373888..1410896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017039729.2 → XP_016895218.1  prolyl 3-hydroxylase 2 isoform X1

    2. XM_008329798.3 → XP_008328020.1  prolyl 3-hydroxylase 2 isoform X2

      UniProtKB/TrEMBL
      A0A3P8WAD2
      Related
      ENSCSEP00000021530.1, ENSCSET00000021807.1
      Conserved Domains (1) summary
      smart00702
      Location:452 → 650
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    Nucleotide Protein
    Heading Accession and Version

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