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    LOC103385960 vang-like protein 2 [ Cynoglossus semilaevis (tongue sole) ]

    Gene ID: 103385960, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC103385960
    Gene description
    vang-like protein 2
    See related
    Ensembl:ENSCSEG00000000214
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cynoglossus semilaevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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    Genomic context

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    See LOC103385960 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current Cse_v1.0 (GCF_000523025.1) 1 NC_024307.1 (23151256..23163666)

    Chromosome 1 - NC_024307.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor (GEF) 11 Neighboring gene uncharacterized LOC107988859 Neighboring gene uncharacterized LOC107988858 Neighboring gene uncharacterized LOC112487750 Neighboring gene uncharacterized LOC103385976 Neighboring gene uncharacterized LOC103386017

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_024307.1 Chromosome 1 Reference Cse_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Wnt signaling pathway, planar cell polarity pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of planar polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vang-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cse_v1.0 Primary Assembly

    Genomic

    1. NC_024307.1 Reference Cse_v1.0 Primary Assembly

      Range
      23151256..23163666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017034178.2 → XP_016889667.1  vang-like protein 2

      UniProtKB/TrEMBL
      A0A3P8UJ22
      Related
      ENSCSEP00000000280.1, ENSCSET00000000304.1
      Conserved Domains (1) summary
      pfam06638
      Location:24 → 528
      Strabismus; Strabismus protein

    2. XM_025060243.1 → XP_024916011.1  vang-like protein 2

      UniProtKB/TrEMBL
      A0A3P8UJ22
      Conserved Domains (1) summary
      pfam06638
      Location:24 → 528
      Strabismus; Strabismus protein
    Nucleotide Protein
    Heading Accession and Version

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