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    HMGN5 high mobility group nucleosome binding domain 5 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 103351914, updated on 11-Mar-2024

    Summary

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    Gene symbol
    HMGN5
    Gene description
    high mobility group nucleosome binding domain 5
    See related
    Ensembl:ENSOCUG00000029345
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See HMGN5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) X NC_067395.1 (72767484..72835873, complement)

    Chromosome X - NC_067395.1Genomic Context describing neighboring genes Neighboring gene tyrosine-protein phosphatase non-receptor type 12-like Neighboring gene small nucleolar RNA SNORA26 Neighboring gene SH3 domain binding glutamate rich protein like Neighboring gene SH3 domain-binding glutamic acid-rich-like protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067395.1 Chromosome X Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleosomal DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group nucleosome-binding domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067395.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      72767484..72835873 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051827382.1 → XP_051683342.1  high mobility group nucleosome-binding domain-containing protein 5

      UniProtKB/TrEMBL
      U3KNB3

    2. XM_051827381.1 → XP_051683341.1  high mobility group nucleosome-binding domain-containing protein 5

      UniProtKB/TrEMBL
      U3KNB3

    3. XM_051827380.1 → XP_051683340.1  high mobility group nucleosome-binding domain-containing protein 5

      UniProtKB/TrEMBL
      U3KNB3

    4. XM_008272973.3 → XP_008271195.1  high mobility group nucleosome-binding domain-containing protein 5

      See identical proteins and their annotated locations for XP_008271195.1

      UniProtKB/TrEMBL
      U3KNB3
      Related
      ENSOCUP00000026722.1
      Conserved Domains (1) summary
      pfam01101
      Location:2 → 93
      HMG14_17; HMG14 and HMG17
    Nucleotide Protein
    Heading Accession and Version

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