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    KIRREL1 kirre like nephrin family adhesion molecule 1 [ Python bivittatus (Burmese python) ]

    Gene ID: 103050219, updated on 11-Mar-2024

    Summary

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    Gene symbol
    KIRREL1
    Gene description
    kirre like nephrin family adhesion molecule 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Python bivittatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
    Also known as
    KIRREL
    Orthologs
    human mouse all
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    Genomic context

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    See KIRREL1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006533180.1 (182020..194757, complement)

    NW_006533180.1Genomic Context describing neighboring genes Neighboring gene hemojuvelin-like Neighboring gene uncharacterized LOC112540723 Neighboring gene SLAM family member 5 Neighboring gene potassium inwardly rectifying channel subfamily J member 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006533180 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kin of IRRE-like protein 1
    Names
    kin of IRRE like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Genomic

    1. NW_006533180.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

      Range
      182020..194757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007429078.3 → XP_007429140.1  kin of IRRE-like protein 1

      UniProtKB/TrEMBL
      A0A9F2KWB6
      Conserved Domains (5) summary
      cd05898
      Location:330 → 427
      Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
      smart00410
      Location:338 → 427
      IG_like; Immunoglobulin like
      pfam07679
      Location:247 → 328
      I-set; Immunoglobulin I-set domain
      pfam13895
      Location:250 → 328
      Ig_2; Immunoglobulin domain
      cl11960
      Location:77 → 158
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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