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    LOC103042284 alpha-2 adrenergic receptor-like [ Astyanax mexicanus (Mexican tetra) ]

    Gene ID: 103042284, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103042284
    Gene description
    alpha-2 adrenergic receptor-like
    See related
    EnsemblRapid:ENSAMXG00025044138
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astyanax mexicanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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    Genomic context

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    See LOC103042284 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current AstMex3_surface (GCF_023375975.1) 25 NC_064432.1 (18271979..18275570)
    102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 21 NC_035917.1 (13707689..13709643)

    Chromosome 25 - NC_064432.1Genomic Context describing neighboring genes Neighboring gene hepatocyte growth factor activator Neighboring gene docking protein 7a Neighboring gene sodium/potassium/calcium exchanger 2 Neighboring gene leukotriene B4 receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha2-adrenergic receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in platelet activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of smooth muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-2 adrenergic receptor-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AstMex3_surface

    Genomic

    1. NC_064432.1 Reference AstMex3_surface

      Range
      18271979..18275570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007230299.4 → XP_007230361.1  alpha-2 adrenergic receptor-like

      UniProtKB/TrEMBL
      A0A8T2KN03, W5LSL7
      Related
      ENSAMXP00025074060.1, ENSAMXT00025096751.1
      Conserved Domains (2) summary
      cd14964
      Location:34 → 55
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:34 → 429
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases