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    LOC103040403 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 [ Astyanax mexicanus (Mexican tetra) ]

    Gene ID: 103040403, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103040403
    Gene description
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1
    See related
    EnsemblRapid:ENSAMXG00025035957
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astyanax mexicanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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    Genomic context

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    See LOC103040403 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current AstMex3_surface (GCF_023375975.1) 4 NC_064411.1 (50464865..50468091)
    102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 17 NC_035913.1 (10382880..10386158)

    Chromosome 4 - NC_064411.1Genomic Context describing neighboring genes Neighboring gene transglutaminase 1 like 1 Neighboring gene abhydrolase domain containing 4, N-acyl phospholipase B Neighboring gene polymeric immunoglobulin receptor Neighboring gene polymeric immunoglobulin receptor-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AstMex3_surface

    Genomic

    1. NC_064411.1 Reference AstMex3_surface

      Range
      50464865..50468091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007242241.4 → XP_007242303.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1

      UniProtKB/TrEMBL
      A0A3B1JX77, A0A8B9H313
      Related
      ENSAMXP00025062010.1, ENSAMXT00025078577.1
      Conserved Domains (1) summary
      pfam02109
      Location:7 → 113
      DAD; DAD family
    Nucleotide Protein
    Heading Accession and Version

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