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    DDX4 DEAD-box helicase 4 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102933166, updated on 10-Mar-2024

    Summary

    Gene symbol
    DDX4
    Gene description
    DEAD-box helicase 4
    See related
    EnsemblRapid:ENSCMYG00015020102
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
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    Genomic context

    See DDX4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 5 NC_051245.2 (34365303..34472278)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 6 NC_051246.1 (34365437..34472278)

    Chromosome 5 - NC_051245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122466038 Neighboring gene phospholipid phosphatase 1 Neighboring gene solute carrier family 38 member 9 Neighboring gene interleukin 31 receptor A Neighboring gene interleukin 6 cytokine family signal transducer

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in P granule IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    probable ATP-dependent RNA helicase DDX4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_051245.2 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      34365303..34472278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043546902.1XP_043402837.1  probable ATP-dependent RNA helicase DDX4 isoform X1

      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    2. XM_043546907.1XP_043402842.1  probable ATP-dependent RNA helicase DDX4 isoform X3

      Related
      ENSCMYP00015030719.1, ENSCMYT00015037828.1
      Conserved Domains (2) summary
      cd18787
      Location:464593
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:195458
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    3. XM_027828366.3XP_027684167.2  probable ATP-dependent RNA helicase DDX4 isoform X1

      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    4. XM_027828369.3XP_027684170.2  probable ATP-dependent RNA helicase DDX4 isoform X1

      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    5. XM_043546920.1XP_043402855.1  probable ATP-dependent RNA helicase DDX4 isoform X14

      Conserved Domains (2) summary
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
      cl38915
      Location:480537
      DEAD-like_helicase_C; C-terminal helicase domain of the DEAD-like helicases
    6. XM_043546905.1XP_043402840.1  probable ATP-dependent RNA helicase DDX4 isoform X3

      Conserved Domains (2) summary
      cd18787
      Location:464593
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:195458
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    7. XM_043546911.1XP_043402846.1  probable ATP-dependent RNA helicase DDX4 isoform X6

      Conserved Domains (2) summary
      cd18787
      Location:435564
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:166429
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    8. XM_043546914.1XP_043402849.1  probable ATP-dependent RNA helicase DDX4 isoform X9

      Conserved Domains (2) summary
      PTZ00110
      Location:59595
      PTZ00110; helicase; Provisional
      cd18052
      Location:153416
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    9. XM_043546918.1XP_043402853.1  probable ATP-dependent RNA helicase DDX4 isoform X12

      Conserved Domains (2) summary
      cd18787
      Location:406535
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:137400
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    10. XM_043546904.1XP_043402839.1  probable ATP-dependent RNA helicase DDX4 isoform X2

      Related
      ENSCMYP00015030711.1, ENSCMYT00015037818.1
      Conserved Domains (2) summary
      cd18787
      Location:465594
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:196459
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    11. XM_043546916.1XP_043402851.1  probable ATP-dependent RNA helicase DDX4 isoform X10

      Related
      ENSCMYP00015030714.1, ENSCMYT00015037823.1
      Conserved Domains (2) summary
      cd18787
      Location:420549
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:151414
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    12. XM_043546910.1XP_043402845.1  probable ATP-dependent RNA helicase DDX4 isoform X5

      Conserved Domains (2) summary
      cd18787
      Location:448577
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:179442
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    13. XM_043546921.1XP_043402856.1  probable ATP-dependent RNA helicase DDX4 isoform X15

      Conserved Domains (2) summary
      cd18052
      Location:179442
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
      cl38915
      Location:448505
      DEAD-like_helicase_C; C-terminal helicase domain of the DEAD-like helicases
    14. XM_043546919.1XP_043402854.1  probable ATP-dependent RNA helicase DDX4 isoform X13

      Conserved Domains (2) summary
      cd18787
      Location:403532
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:134397
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    15. XM_043546906.1XP_043402841.1  probable ATP-dependent RNA helicase DDX4 isoform X3

      Conserved Domains (2) summary
      cd18787
      Location:464593
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:195458
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    16. XM_043546915.1XP_043402850.1  probable ATP-dependent RNA helicase DDX4 isoform X9

      Conserved Domains (2) summary
      PTZ00110
      Location:59595
      PTZ00110; helicase; Provisional
      cd18052
      Location:153416
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    17. XM_043546909.1XP_043402844.1  probable ATP-dependent RNA helicase DDX4 isoform X4

      Conserved Domains (2) summary
      cd18787
      Location:463592
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:194457
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    18. XM_043546912.1XP_043402847.1  probable ATP-dependent RNA helicase DDX4 isoform X7

      Conserved Domains (2) summary
      cd18787
      Location:432561
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:163426
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    19. XM_043546908.1XP_043402843.1  probable ATP-dependent RNA helicase DDX4 isoform X3

      Conserved Domains (2) summary
      cd18787
      Location:464593
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:195458
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    20. XM_043546903.1XP_043402838.1  probable ATP-dependent RNA helicase DDX4 isoform X1

      Related
      ENSCMYP00015030698.1, ENSCMYT00015037800.1
      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    21. XM_043546900.1XP_043402835.1  probable ATP-dependent RNA helicase DDX4 isoform X1

      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    22. XM_043546901.1XP_043402836.1  probable ATP-dependent RNA helicase DDX4 isoform X1

      Conserved Domains (2) summary
      cd18787
      Location:480609
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:211474
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    23. XM_043546913.1XP_043402848.1  probable ATP-dependent RNA helicase DDX4 isoform X8

      Conserved Domains (2) summary
      cd18787
      Location:424553
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:155418
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4
    24. XM_043546917.1XP_043402852.1  probable ATP-dependent RNA helicase DDX4 isoform X11

      Conserved Domains (2) summary
      cd18787
      Location:407536
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd18052
      Location:138401
      DEADc_DDX4; DEAD-box helicase domain of DEAD box protein 4