U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC102627257 uncharacterized LOC102627257 [ Citrus sinensis (sweet orange) ]

    Gene ID: 102627257, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC102627257
    Gene description
    uncharacterized LOC102627257
    Locus tag
    KPL70_027758
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC102627257 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current DVS_A1.0 (GCF_022201045.2) 9 NC_068564.1 (33624869..33628045)
    102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 4 NC_023049.1 (415385..418593, complement)

    Chromosome 9 - NC_068564.1Genomic Context describing neighboring genes Neighboring gene ABC transporter I family member 1 Neighboring gene FIP1[V]-like protein Neighboring gene probable CCR4-associated factor 1 homolog 6 Neighboring gene transfer RNA threonine (anticodon AGU)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPPI protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of TRAPPII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of TRAPPIII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC102627257
    Names
    trafficking protein particle complex subunit 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DVS_A1.0 Primary Assembly

    Genomic

    1. NC_068564.1 Reference DVS_A1.0 Primary Assembly

      Range
      33624869..33628045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025097286.2 → XP_024953054.2  uncharacterized protein LOC102627257 isoform X1

      UniProtKB/TrEMBL
      A0A067F7E7

    2. XM_006473915.4 → XP_006473978.1  uncharacterized protein LOC102627257 isoform X2

      See identical proteins and their annotated locations for XP_006473978.1

      UniProtKB/TrEMBL
      A0A067EW93, A0A067EWE0
      Conserved Domains (1) summary
      cd14943
      Location:25 → 182
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases