U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RABEP1 rabaptin, RAB GTPase binding effector protein 1 [ Vicugna pacos (alpaca) ]

    Gene ID: 102527029, updated on 10-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RABEP1
    Gene description
    rabaptin, RAB GTPase binding effector protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vicugna pacos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RABEP1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_022038907.1 (978117..1160486, complement)
    101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005883004.1 (389733..500057)

    NW_022038907.1Genomic Context describing neighboring genes Neighboring gene RPA interacting protein Neighboring gene nucleoporin 88 Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene SLP adaptor and CSK interacting membrane protein Neighboring gene zinc finger protein 594 Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene ZFP3 zinc finger protein Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene kinesin family member 1C Neighboring gene inhibitor of CDK, cyclin A1 interacting protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    rab GTPase-binding effector protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VicPac3.1 Primary Assembly

    Genomic

    1. NW_022038907.1 Reference VicPac3.1 Primary Assembly

      Range
      978117..1160486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031674916.1 → XP_031530776.1  rab GTPase-binding effector protein 1

      UniProtKB/TrEMBL
      A0A6J3ADJ2
      Conserved Domains (2) summary
      pfam03528
      Location:107 → 591
      Rabaptin
      pfam09311
      Location:629 → 935
      Rab5-bind; Rabaptin-like protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.