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    LOC102489276 elongation of very long chain fatty acids protein 1-like [ Tupaia chinensis (Chinese tree shrew) ]

    Gene ID: 102489276, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC102489276
    Gene description
    elongation of very long chain fatty acids protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tupaia chinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
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    Genomic context

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    See LOC102489276 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006210128.1 (370947..378613, complement)

    NW_006210128.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106734264 Neighboring gene potassium voltage-gated channel subfamily A member 5 Neighboring gene potassium voltage-gated channel subfamily A member 1 Neighboring gene potassium voltage-gated channel subfamily A member 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006210128 Unplaced Scaffold Reference TupChi_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: elongation of very long chain fatty acids protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TupChi_1.0

    Genomic

    1. NW_006210128.1 Reference TupChi_1.0

      Range
      370947..378613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014585662.2 → XP_014441148.1  LOW QUALITY PROTEIN: elongation of very long chain fatty acids protein 1-like

      Conserved Domains (1) summary
      pfam01151
      Location:145 → 379
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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