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    LOC102448003 IgGFc-binding protein-like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

    Gene ID: 102448003, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC102448003
    Gene description
    IgGFc-binding protein-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pelodiscus sinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
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    Genomic context

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    See LOC102448003 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854900.1 (76976..132760)

    NW_005854900.1Genomic Context describing neighboring genes Neighboring gene IgGFc-binding protein-like Neighboring gene IgGFc-binding protein-like Neighboring gene IgGFc-binding protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005854900 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: IgGFc-binding protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PelSin_1.0 Primary Assembly

    Genomic

    1. NW_005854900.1 Reference PelSin_1.0 Primary Assembly

      Range
      76976..132760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025184205.1 → XP_025039990.1  LOW QUALITY PROTEIN: IgGFc-binding protein-like

      Conserved Domains (8) summary
      smart00216
      Location:836 → 1001
      VWD; von Willebrand factor (vWF) type D domain
      smart00832
      Location:2458 → 2532
      C8; This domain contains 8 conserved cysteine residues
      cd01647
      Location:2834 → 3010
      RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
      cd09274
      Location:3129 → 3249
      RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
      pfam00094
      Location:2262 → 2418
      VWD; von Willebrand factor type D domain
      pfam01826
      Location:2146 → 2199
      TIL; Trypsin Inhibitor like cysteine rich domain
      cl02516
      Location:2640 → 2800
      VWD; von Willebrand factor type D domain
      cl17735
      Location:2590 → 2643
      VWC; von Willebrand factor type C domain
    Nucleotide Protein
    Heading Accession and Version

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