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    LOC102366172 telethonin [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102366172, updated on 26-Apr-2024

    Summary

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    Gene symbol
    LOC102366172
    Gene description
    telethonin
    See related
    Ensembl:ENSLACG00000015811
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    TCAP
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    Genomic context

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    See LOC102366172 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 12 NC_088150.1 (10847322..10850639)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819203.1 (1362834..1364648, complement)

    Chromosome 12 - NC_088150.1Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene melanoregulin Neighboring gene telethonin Neighboring gene phenylethanolamine N-methyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-macromolecule adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of muscle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables titin Z domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables titin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cardiac muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cardiac muscle tissue morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cardiac myofibril assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in detection of muscle stretch IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcomerogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle myosin thick filament assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle thin filament assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    telethonin
    Names
    titin-cap

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088150.1 Reference fLatCha1.pri

      Range
      10847322..10850639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005994032.3 → XP_005994094.1  telethonin

      UniProtKB/TrEMBL
      H3B7S5
      Related
      ENSLACP00000017946.1
      Conserved Domains (1) summary
      pfam09470
      Location:30 → 183
      Telethonin; Telethonin protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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