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    EDAR ectodysplasin A receptor [ Zonotrichia albicollis (white-throated sparrow) ]

    Gene ID: 102073988, updated on 3-Aug-2024

    Summary

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    Gene symbol
    EDAR
    Gene description
    ectodysplasin A receptor
    See related
    Ensembl:ENSZALG00000006867
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zonotrichia albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
    Orthologs
    human mouse all
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    Genomic context

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    See EDAR in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081594.1 (1350414..1376135, complement)

    NW_005081594.1Genomic Context describing neighboring genes Neighboring gene RANBP2 like and GRIP domain containing 4 Neighboring gene coiled-coil domain containing 138 Neighboring gene SH3 domain containing ring finger 3 Neighboring gene septin 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005081594 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of JNK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member EDAR

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zonotrichia_albicollis-1.0.1

    Genomic

    1. NW_005081594.1 Reference Zonotrichia_albicollis-1.0.1

      Range
      1350414..1376135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005487986.3 → XP_005488043.1  tumor necrosis factor receptor superfamily member EDAR

      UniProtKB/TrEMBL
      A0A8D2MIX4
      Related
      ENSZALP00000007791.1, ENSZALT00000011073.1
      Conserved Domains (2) summary
      cd13421
      Location:13 → 148
      TNFRSF_EDAR; Tumor necrosis factor receptor superfamily member ectodysplasin A receptor (EDAR)
      cl14633
      Location:354 → 428
      DD; Death Domain Superfamily of protein-protein interaction domains
    Nucleotide Protein
    Heading Accession and Version

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