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    SFRP1 secreted frizzled related protein 1 [ Ochotona princeps (American pika) ]

    Gene ID: 101518892, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SFRP1
    Gene description
    secreted frizzled related protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ochotona princeps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
    Orthologs
    human mouse all
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    Genomic context

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    See SFRP1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 11 NC_080842.1 (6750838..6784768, complement)
    102 previous assembly OchPri4.0 (GCF_014633375.1) 2A NC_050560.1 (69469895..69503341)

    Chromosome 11 - NC_080842.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger matrin-type 4 Neighboring gene eukaryotic initiation factor 4A-II-like Neighboring gene large ribosomal subunit protein uL30-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Wnt-protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in non-canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secreted frizzled-related protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOchPri1.hap1

    Genomic

    1. NC_080842.1 Reference mOchPri1.hap1

      Range
      6750838..6784768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004592727.2 → XP_004592784.2  secreted frizzled-related protein 1

    Nucleotide Protein
    Heading Accession and Version

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