U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101476808 solute carrier organic anion transporter family member 5A1 [ Maylandia zebra (zebra mbuna) ]

    Gene ID: 101476808, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101476808
    Gene description
    solute carrier organic anion transporter family member 5A1
    See related
    Ensembl:ENSMZEG00005007613
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Maylandia zebra
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101476808 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current M_zebra_UMD2a (GCF_000238955.4) Unplaced Scaffold NW_020192487.1 (146168..204869)
    101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004532002.1 (18..44499, complement)

    NW_020192487.1Genomic Context describing neighboring genes Neighboring gene double-stranded RNA-specific editase B2 Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene tripartite motif-containing protein 16-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium-independent organic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium-independent organic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    solute carrier organic anion transporter family member 5A1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference M_zebra_UMD2a Primary Assembly

    Genomic

    1. NW_020192487.1 Reference M_zebra_UMD2a Primary Assembly

      Range
      146168..204869
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024799869.1 → XP_024655637.1  solute carrier organic anion transporter family member 5A1 isoform X2

      Conserved Domains (1) summary
      pfam03137
      Location:146 → 718
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    2. XM_024799870.1 → XP_024655638.1  solute carrier organic anion transporter family member 5A1 isoform X3

      Conserved Domains (1) summary
      pfam03137
      Location:146 → 718
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    3. XM_004574576.4 → XP_004574633.2  solute carrier organic anion transporter family member 5A1 isoform X1

      UniProtKB/TrEMBL
      A0A3P9BJG5
      Related
      ENSMZEP00005010057.1, ENSMZET00005010423.1
      Conserved Domains (1) summary
      pfam03137
      Location:146 → 754
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    4. XM_023155102.2 → XP_023010870.1  solute carrier organic anion transporter family member 5A1 isoform X4

      Conserved Domains (1) summary
      pfam03137
      Location:32 → 500
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    RNA

    1. XR_003022450.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases