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    ccdc18 coiled-coil domain containing 18 [ Maylandia zebra (zebra mbuna) ]

    Gene ID: 101469625, updated on 12-Sep-2024

    Summary

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    Gene symbol
    ccdc18
    Gene description
    coiled-coil domain containing 18
    See related
    Ensembl:ENSMZEG00005004472
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Maylandia zebra
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
    Orthologs
    zebrafish all
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    Genomic context

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    See ccdc18 in Genome Data Viewer
    Location:
    chromosome: LG18
    Exon count:
    25
    Annotation release Status Assembly LG Location
    104 current M_zebra_UMD2a (GCF_000238955.4) LG18 NC_036797.1 (18730752..18744482, complement)
    101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531884.1 (1087895..1101589)

    Linkage Group LG18 - NC_036797.1Genomic Context describing neighboring genes Neighboring gene Wnt ligand secretion mediator Neighboring gene scinderin like b Neighboring gene metal response element binding transcription factor 2 Neighboring gene divergent protein kinase domain 1Aa

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference M_zebra_UMD2a Primary Assembly

    Genomic

    1. NC_036797.1 Reference M_zebra_UMD2a Primary Assembly

      Range
      18730752..18744482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004570562.3 → XP_004570619.1  coiled-coil domain-containing protein 18 isoform X2

      UniProtKB/TrEMBL
      A0A3P9B781
      Related
      ENSMZEP00005005769.1, ENSMZET00005006021.1
      Conserved Domains (2) summary
      pfam01576
      Location:70 → 1060
      Myosin_tail_1; Myosin tail
      pfam08702
      Location:757 → 858
      Fib_alpha; Fibrinogen alpha/beta chain family

    2. XM_004570561.3 → XP_004570618.1  coiled-coil domain-containing protein 18 isoform X1

      Conserved Domains (3) summary
      pfam01576
      Location:121 → 1111
      Myosin_tail_1; Myosin tail
      pfam08702
      Location:808 → 909
      Fib_alpha; Fibrinogen alpha/beta chain family
      pfam15035
      Location:678 → 760
      Rootletin; Ciliary rootlet component, centrosome cohesion
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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