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    LOC101409047 neuroligin 1 [ Ceratotherium simum simum (southern white rhinoceros) ]

    Gene ID: 101409047, updated on 8-Mar-2024

    Summary

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    Gene symbol
    LOC101409047
    Gene description
    neuroligin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ceratotherium simum simum (sub-species: simum)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium
    Also known as
    NLGN1
    Orthologs
    human mouse all
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    Genomic context

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    See LOC101409047 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current CerSimSim1.0 (GCF_000283155.1) Unplaced Scaffold NW_004454169.1 (23302859..23973274, complement)

    NW_004454169.1Genomic Context describing neighboring genes Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 2 Neighboring gene probable ATP-dependent RNA helicase DDX5 pseudogene Neighboring gene anaphase-promoting complex subunit 15 pseudogene Neighboring gene spermatogenesis associated 16 Neighboring gene epithelial cell transforming 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004454169.1 Unplaced Scaffold Reference CerSimSim1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurexin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in postsynaptic membrane assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in presynaptic membrane assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic specialization membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuroligin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ceratotherium simum simum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CerSimSim1.0 Primary Assembly

    Genomic

    1. NW_004454169.1 Reference CerSimSim1.0 Primary Assembly

      Range
      23302859..23973274 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004424723.2 → XP_004424780.1  neuroligin-1 isoform X2

      Conserved Domains (2) summary
      COG0657
      Location:158 → 264
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:50 → 597
      COesterase; Carboxylesterase family

    2. XM_014783173.1 → XP_014638659.1  neuroligin-1 isoform X1

      Conserved Domains (2) summary
      COG0657
      Location:158 → 264
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:50 → 606
      COesterase; Carboxylesterase family
    Nucleotide Protein
    Heading Accession and Version

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