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    LOC101263643 NAC domain-containing protein 43 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101263643, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101263643
    Gene description
    NAC domain-containing protein 43
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101263643 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 10 NC_015447.3 (11300..12410, complement)
    102 previous assembly SL2.50 (GCF_000188115.3) 10 NC_015447.2 (11300..12410, complement)

    Chromosome 10 - NC_015447.3Genomic Context describing neighboring genes Neighboring gene SUN family protein SUN27 Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene uncharacterized LOC101263352 Neighboring gene two-component response regulator-like APRR9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAC domain-containing protein 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015447.3 Reference SL3.0 Primary Assembly

      Range
      11300..12410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004248375.3 → XP_004248423.1  NAC domain-containing protein 43

      UniProtKB/TrEMBL
      A0A3Q7J528
      Conserved Domains (1) summary
      pfam02365
      Location:18 → 59
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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