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    LOC101260463 peroxidase N [ Solanum lycopersicum (tomato) ]

    Gene ID: 101260463, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101260463
    Gene description
    peroxidase N
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101260463 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 1 NC_015438.3 (16712001..16714512, complement)
    102 previous assembly SL2.50 (GCF_000188115.3) 1 NC_015438.2 (16780421..16782931, complement)

    Chromosome 1 - NC_015438.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109119539 Neighboring gene uncharacterized LOC109120493 Neighboring gene F-box/LRR-repeat protein At3g48880-like Neighboring gene uncharacterized LOC101248606

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxidase N

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015438.3 Reference SL3.0 Primary Assembly

      Range
      16712001..16714512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004228298.2 → XP_004228346.1  peroxidase N

      UniProtKB/TrEMBL
      A0A3Q7EBG8
    Nucleotide Protein
    Heading Accession and Version

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