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    LOC101258259 heavy metal-associated isoprenylated plant protein 37 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101258259, updated on 1-Nov-2024

    Summary

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    Gene symbol
    LOC101258259
    Gene description
    heavy metal-associated isoprenylated plant protein 37
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101258259 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 5 NC_090804.1 (2944548..2947903, complement)
    103 previous assembly SL3.0 (GCF_000188115.4) 5 NC_015442.3 (2673015..2676176, complement)

    Chromosome 5 - NC_090804.1Genomic Context describing neighboring genes Neighboring gene multicopper oxidase LPR2 Neighboring gene uncharacterized LOC138348379 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene putative fasciclin-like arabinogalactan protein 20 Neighboring gene pentatricopeptide repeat-containing protein At1g71060, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heavy metal-associated isoprenylated plant protein 37

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090804.1 Reference SLM_r2.1 Primary Assembly

      Range
      2944548..2947903 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004238807.5 → XP_004238855.1  heavy metal-associated isoprenylated plant protein 37

      Conserved Domains (1) summary
      pfam00403
      Location:19 → 70
      HMA; Heavy-metal-associated domain
    Nucleotide Protein
    Heading Accession and Version

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