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    LOC101254646 probable flavin-containing monooxygenase 1 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101254646, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101254646
    Gene description
    probable flavin-containing monooxygenase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101254646 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 1 NC_015438.3 (98138685..98141736, complement)
    102 previous assembly SL2.50 (GCF_000188115.3) 1 NC_015438.2 (98226298..98228841, complement)

    Chromosome 1 - NC_015438.3Genomic Context describing neighboring genes Neighboring gene probable flavin-containing monooxygenase 1 Neighboring gene probable flavin-containing monooxygenase 1 Neighboring gene SEC1 family transport protein SLY1 Neighboring gene metal-independent phosphoserine phosphatase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: probable flavin-containing monooxygenase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015438.3 Reference SL3.0 Primary Assembly

      Range
      98138685..98141736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004231042.4 → XP_004231090.2  LOW QUALITY PROTEIN: probable flavin-containing monooxygenase 1

      Conserved Domains (1) summary
      cl26174
      Location:18 → 506
      K_oxygenase; L-lysine 6-monooxygenase (NADPH-requiring)
    Nucleotide Protein
    Heading Accession and Version

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