U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101248739 cullin-4 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101248739, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101248739
    Gene description
    cullin-4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 2 NC_015439.3 (40766878..40781901)
    102 previous assembly SL2.50 (GCF_000188115.3) 2 NC_015439.2 (40199043..40213871)

    Chromosome 2 - NC_015439.3Genomic Context describing neighboring genes Neighboring gene katanin p60 ATPase-containing subunit A-like 2 Neighboring gene glucan endo-1,3-beta-glucosidase 14 Neighboring gene uncharacterized LOC104645894 Neighboring gene F-box protein At5g46170 Neighboring gene pheophytinase, chloroplastic

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cullin-RING ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cullin-4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015439.3 Reference SL3.0 Primary Assembly

      Range
      40766878..40781901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004233077.4 → XP_004233125.1  cullin-4

      UniProtKB/TrEMBL
      A0A3Q7FNF3, A9LK40
      Conserved Domains (3) summary
      smart00182
      Location:484 → 625
      CULLIN; Cullin
      smart00884
      Location:731 → 795
      Cullin_Nedd8; Cullin protein neddylation domain
      pfam00888
      Location:107 → 702
      Cullin; Cullin family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases