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    LOC101220829 gibberellin 2-beta-dioxygenase 6 [ Cucumis sativus (cucumber) ]

    Gene ID: 101220829, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101220829
    Gene description
    gibberellin 2-beta-dioxygenase 6
    Locus tag
    Csa_018434
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101220829 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 5 NC_026659.2 (12419428..12421301)
    101 previous assembly ASM407v2 (GCF_000004075.2) 5 NC_026659.1 (1686147..1691112)

    Chromosome 5 - NC_026659.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116403898 Neighboring gene serine/threonine-protein kinase PITSLRE Neighboring gene uncharacterized LOC116403867 Neighboring gene uncharacterized LOC101221064 Neighboring gene ADP-ribosylation factor GTPase-activating protein AGD4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gibberellin 2-beta-dioxygenase 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026659.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      12419428..12421301
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031885692.1 → XP_031741552.1  gibberellin 2-beta-dioxygenase 6

      Conserved Domains (1) summary
      PLN02984
      Location:11 → 269
      PLN02984; oxidoreductase, 2OG-Fe(II) oxygenase family protein
    Nucleotide Protein
    Heading Accession and Version

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