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    LOC101220722 calmodulin-binding receptor-like cytoplasmic kinase 2 [ Cucumis sativus (cucumber) ]

    Gene ID: 101220722, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101220722
    Gene description
    calmodulin-binding receptor-like cytoplasmic kinase 2
    Locus tag
    Csa_009899
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101220722 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (7333632..7336975, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (7151879..7155192, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene mechanosensitive ion channel protein 1, mitochondrial Neighboring gene DNA replication complex GINS protein SLD5 Neighboring gene probable E3 ubiquitin-protein ligase RHB1A Neighboring gene AT-rich interactive domain-containing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmodulin-binding receptor-like cytoplasmic kinase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      7333632..7336975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004133809.3 → XP_004133857.1  calmodulin-binding receptor-like cytoplasmic kinase 2

      See identical proteins and their annotated locations for XP_004133857.1

      UniProtKB/TrEMBL
      A0A0A0L7F9
      Conserved Domains (1) summary
      cd14066
      Location:153 → 422
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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