U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101220192 protein ACCELERATED CELL DEATH 6 [ Cucumis sativus (cucumber) ]

    Gene ID: 101220192, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101220192
    Gene description
    protein ACCELERATED CELL DEATH 6
    Locus tag
    Csa_019478
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101220192 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (2022197..2025961, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (1883645..1887338, complement)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene protein ACCELERATED CELL DEATH 6 Neighboring gene uncharacterized LOC116402257 Neighboring gene flowering locus K homology domain Neighboring gene uncharacterized protein At2g34160

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein ACCELERATED CELL DEATH 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      2022197..2025961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004139337.3 → XP_004139385.1  protein ACCELERATED CELL DEATH 6

      See identical proteins and their annotated locations for XP_004139385.1

      UniProtKB/TrEMBL
      A0A0A0LFG3
      Conserved Domains (4) summary
      COG0666
      Location:257 → 432
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:283 → 315
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:55 → 156
      Ank_2; Ankyrin repeats (3 copies)
      pfam13962
      Location:508 → 611
      PGG; Domain of unknown function
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases