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    LOC101219993 ethylene-responsive transcription factor 3 [ Cucumis sativus (cucumber) ]

    Gene ID: 101219993, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101219993
    Gene description
    ethylene-responsive transcription factor 3
    Locus tag
    Csa_010710
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    Also known as
    erf-7
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    Genomic context

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    See LOC101219993 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (4075068..4075712, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (3926359..3927286, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene grpE protein homolog 2, mitochondrial Neighboring gene EH domain-containing protein 1 Neighboring gene glucan endo-1,3-beta-glucosidase 13 Neighboring gene small ubiquitin-related modifier 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor 3
    Names
    ethylene-responsive transcription factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001308917.1 → NP_001295846.1  ethylene-responsive transcription factor 3

      See identical proteins and their annotated locations for NP_001295846.1

      Status: PROVISIONAL

      Source sequence(s)
      LM994815
      UniProtKB/TrEMBL
      A0A090IQD0, A0A0A0L500
      Conserved Domains (1) summary
      smart00380
      Location:26 → 89
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs

    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      4075068..4075712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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