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    LOC101219784 BRCT domain-containing protein At4g02110 [ Cucumis sativus (cucumber) ]

    Gene ID: 101219784, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC101219784
    Gene description
    BRCT domain-containing protein At4g02110
    Locus tag
    Csa_016090
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101219784 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 7 NC_026661.2 (18883310..18890279)
    101 previous assembly ASM407v2 (GCF_000004075.2) 7 NC_026661.1 (15661950..15669302)

    Chromosome 7 - NC_026661.2Genomic Context describing neighboring genes Neighboring gene phospholipase A1 PLIP2, chloroplastic Neighboring gene transmembrane protein 205 Neighboring gene uncharacterized LOC101222380 Neighboring gene probable beta-D-xylosidase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    BRCT domain-containing protein At4g02110

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026661.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      18883310..18890279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004136108.3 → XP_004136156.1  BRCT domain-containing protein At4g02110 isoform X1

      UniProtKB/TrEMBL
      A0A0A0K827
      Conserved Domains (3) summary
      cd17738
      Location:1054 → 1129
      BRCT_TopBP1_rpt7; seventh BRCT domain of DNA topoisomerase 2-binding protein 1
      cl00038
      Location:112 → 186
      BRCT; C-terminal domain of the breast cancer suppressor protein (BRCA1) and related domains
      cl22851
      Location:1300 → 1351
      PHD_SF; PHD finger superfamily

    2. XM_011661088.2 → XP_011659390.1  BRCT domain-containing protein At4g02110 isoform X2

      UniProtKB/TrEMBL
      A0A0A0K827
      Conserved Domains (3) summary
      smart00292
      Location:944 → 1012
      BRCT; breast cancer carboxy-terminal domain
      pfam12738
      Location:1 → 63
      PTCB-BRCT; twin BRCT domain
      cl22851
      Location:1187 → 1238
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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