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    LOC101215563 uncharacterized LOC101215563 [ Cucumis sativus (cucumber) ]

    Gene ID: 101215563, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101215563
    Gene description
    uncharacterized LOC101215563
    Locus tag
    Csa_022501
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101215563 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (18913445..18918549, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (17368872..17372716, complement)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene putative pectinesterase 11 Neighboring gene flocculation protein FLO11 Neighboring gene CBS domain-containing protein CBSX3, mitochondrial Neighboring gene gamma carbonic anhydrase 1, mitochondrial Neighboring gene uncharacterized sugar kinase slr0537

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC101215563

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      18913445..18918549 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031881012.1 → XP_031736872.1  uncharacterized protein LOC101215563

      UniProtKB/TrEMBL
      A0A0A0LL29
      Conserved Domains (2) summary
      PLN03218
      Location:374 → 650
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:387 → 413
      PPR; PPR repeat [structural motif]

    2. XM_004152726.3 → XP_004152774.1  uncharacterized protein LOC101215563

      See identical proteins and their annotated locations for XP_004152774.1

      UniProtKB/TrEMBL
      A0A0A0LL29
      Conserved Domains (2) summary
      PLN03218
      Location:374 → 650
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:387 → 413
      PPR; PPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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