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    LOC101214812 auxin-responsive protein SAUR78 [ Cucumis sativus (cucumber) ]

    Gene ID: 101214812, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101214812
    Gene description
    auxin-responsive protein SAUR78
    Locus tag
    Csa_001247
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101214812 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (26707423..26708399, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (25445461..25445943, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene dormancy-associated protein homolog 4 Neighboring gene 40S ribosomal protein SA Neighboring gene GDSL esterase/lipase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to auxin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    auxin-responsive protein SAUR78

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      26707423..26708399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011653418.2 → XP_011651720.1  auxin-responsive protein SAUR78

      See identical proteins and their annotated locations for XP_011651720.1

      UniProtKB/TrEMBL
      A0A0A0LBZ7
      Conserved Domains (1) summary
      pfam02519
      Location:9 → 106
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version

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