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    LOC101213072 formin-like protein 5 [ Cucumis sativus (cucumber) ]

    Gene ID: 101213072, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101213072
    Gene description
    formin-like protein 5
    Locus tag
    Csa_010253
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101213072 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (20298145..20304994, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (19648181..19654900, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105434897 Neighboring gene histone H2A.6 Neighboring gene uncharacterized LOC116402435 Neighboring gene uncharacterized LOC116402526

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    formin-like protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      20298145..20304994 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031883561.1 → XP_031739421.1  formin-like protein 5

      UniProtKB/TrEMBL
      A0A0A0LBD0
      Conserved Domains (2) summary
      pfam02181
      Location:452 → 851
      FH2; Formin Homology 2 Domain
      pfam16058
      Location:875 → 945
      Mucin-like

    2. XM_011653159.2 → XP_011651461.1  formin-like protein 5

      See identical proteins and their annotated locations for XP_011651461.1

      UniProtKB/TrEMBL
      A0A0A0LBD0
      Conserved Domains (2) summary
      pfam02181
      Location:452 → 851
      FH2; Formin Homology 2 Domain
      pfam16058
      Location:875 → 945
      Mucin-like
    Nucleotide Protein
    Heading Accession and Version

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