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    LOC101209595 vesicle-associated membrane protein 711 [ Cucumis sativus (cucumber) ]

    Gene ID: 101209595, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101209595
    Gene description
    vesicle-associated membrane protein 711
    Locus tag
    Csa_000837
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101209595 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (37813140..37816099, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (36746037..36748877, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101209841 Neighboring gene protein FAR1-RELATED SEQUENCE 6 Neighboring gene hypothetical protein Neighboring gene DNA-directed RNA polymerases II, IV and V subunit 6A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicle-associated membrane protein 711

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      37813140..37816099 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004136311.3 → XP_004136359.1  vesicle-associated membrane protein 711

      See identical proteins and their annotated locations for XP_004136359.1

      UniProtKB/TrEMBL
      A0A0A0LH93
      Conserved Domains (2) summary
      cd14824
      Location:4 → 118
      Longin; longin domain
      pfam00957
      Location:123 → 189
      Synaptobrevin
    Nucleotide Protein
    Heading Accession and Version

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