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    LOC101205958 probable receptor-like protein kinase At1g80640 [ Cucumis sativus (cucumber) ]

    Gene ID: 101205958, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101205958
    Gene description
    probable receptor-like protein kinase At1g80640
    Locus tag
    Csa_021973
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101205958 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (21306423..21310644)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (19739330..19752188)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101213579 Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene aspartate aminotransferase, chloroplastic Neighboring gene 60S ribosomal protein L39

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable receptor-like protein kinase At1g80640

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      21306423..21310644
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004138800.3 → XP_004138848.2  probable receptor-like protein kinase At1g80640

      See identical proteins and their annotated locations for XP_004138848.2

      UniProtKB/TrEMBL
      A0A0A0LMF9
      Conserved Domains (1) summary
      cd14066
      Location:157 → 424
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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