U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101205875 polygalacturonase QRT3 [ Cucumis sativus (cucumber) ]

    Gene ID: 101205875, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101205875
    Gene description
    polygalacturonase QRT3
    Locus tag
    Csa_004206
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101205875 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 6 NC_026660.2 (30785278..30788635)
    101 previous assembly ASM407v2 (GCF_000004075.2) 6 NC_026660.1 (28768496..28771950)

    Chromosome 6 - NC_026660.2Genomic Context describing neighboring genes Neighboring gene protein SUPPRESSOR OF FRI 4 Neighboring gene uncharacterized LOC101206493 Neighboring gene RING-H2 finger protein ATL73 Neighboring gene glycine-rich RNA-binding protein 4, mitochondrial

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polygalacturonase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    polygalacturonase QRT3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026660.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      30785278..30788635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004134491.3 → XP_004134539.1  polygalacturonase QRT3

      See identical proteins and their annotated locations for XP_004134539.1

      UniProtKB/TrEMBL
      A0A0A0KMC1
      Conserved Domains (1) summary
      pfam13229
      Location:195 → 333
      Beta_helix; Right handed beta helix region
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases