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    CD5 CD5 molecule [ Felis catus (domestic cat) ]

    Gene ID: 101083293, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD5
    Official Full Name
    CD5 molecule
    Primary source
    VGNC:VGNC:60632
    See related
    EnsemblRapid:ENSFCTG00005033189
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    See CD5 in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (105045112..105065490)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (107249609..107269628)

    Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 132A Neighboring gene solute carrier family 15 member 3 Neighboring gene CD6 molecule Neighboring gene VPS37C subunit of ESCRT-I Neighboring gene uncharacterized LOC109492156 Neighboring gene pregnancy-associated glycoprotein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell surface glycoprotein CD5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      105045112..105065490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006937372.4 → XP_006937434.2  T-cell surface glycoprotein CD5

      UniProtKB/TrEMBL
      M3WJA0
      Related
      ENSFCTP00005061029.1, ENSFCTT00005091515.1
      Conserved Domains (1) summary
      smart00202
      Location:34 → 133
      SR; Scavenger receptor Cys-rich
    Nucleotide Protein
    Heading Accession and Version

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