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    creb5a cAMP responsive element binding protein 5a [ Takifugu rubripes (torafugu) ]

    Gene ID: 101065138, updated on 8-Mar-2024

    Summary

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    Gene symbol
    creb5a
    Gene description
    cAMP responsive element binding protein 5a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Orthologs
    zebrafish all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (3795720..3813620, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (2934192..2939673, complement)

    Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene oxysterol-binding protein-related protein 3 Neighboring gene uncharacterized LOC115251751 Neighboring gene TLR4 interactor with leucine-rich repeats Neighboring gene JAZF zinc finger 1a Neighboring gene Tax1 (human T-cell leukemia virus type I) binding protein 1a Neighboring gene 3-hydroxyisobutyrate dehydrogenase a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cAMP response element binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic AMP-responsive element-binding protein 5-like
    Names
    cAMP responsive element binding protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

      Range
      3795720..3813620 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029845611.1 → XP_029701471.1  cyclic AMP-responsive element-binding protein 5-like isoform X3

      UniProtKB/TrEMBL
      Q1KL19
      Conserved Domains (2) summary
      cd14687
      Location:367 → 426
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      pfam09770
      Location:97 → 220
      PAT1; Topoisomerase II-associated protein PAT1

    2. XM_029845607.1 → XP_029701467.1  cyclic AMP-responsive element-binding protein 5-like isoform X1

      UniProtKB/TrEMBL
      Q1KL19

    3. XM_029845610.1 → XP_029701470.1  cyclic AMP-responsive element-binding protein 5-like isoform X2

      UniProtKB/TrEMBL
      Q1KL19

    4. XM_029845609.1 → XP_029701469.1  cyclic AMP-responsive element-binding protein 5-like isoform X2

      UniProtKB/TrEMBL
      Q1KL19

    5. XM_029845608.1 → XP_029701468.1  cyclic AMP-responsive element-binding protein 5-like isoform X2

      UniProtKB/TrEMBL
      Q1KL19
      Conserved Domains (2) summary
      cd14687
      Location:360 → 419
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      pfam09770
      Location:90 → 213
      PAT1; Topoisomerase II-associated protein PAT1
    Nucleotide Protein
    Heading Accession and Version

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