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    LOC100838384 notchless protein homolog [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100838384, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100838384
    Gene description
    notchless protein homolog
    Locus tag
    BRADI_2g14270v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100838384 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (12866183..12872036)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (12865940..12871801)

    Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene pathogenesis-related protein PRB1-3-like Neighboring gene sm-like protein LSM8 Neighboring gene alpha carbonic anhydrase 7 Neighboring gene uncharacterized LOC100844359

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    notchless protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      12866183..12872036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003567729.4 → XP_003567777.1  notchless protein homolog

      UniProtKB/TrEMBL
      I1HFQ9
      Conserved Domains (5) summary
      smart00320
      Location:97 → 134
      WD40; WD40 repeats
      COG2319
      Location:99 → 469
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:140 → 469
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08154
      Location:9 → 69
      NLE; NLE (NUC135) domain
      sd00039
      Location:151 → 189
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases