U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100832017 BTB/POZ and MATH domain-containing protein 1 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100832017, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100832017
    Gene description
    BTB/POZ and MATH domain-containing protein 1
    Locus tag
    BRADI_1g32260v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100832017 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (27690617..27692252, complement)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (27691345..27692980, complement)

    Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100841692 Neighboring gene uncharacterized LOC112269902 Neighboring gene BTB/POZ and MATH domain-containing protein 2 Neighboring gene BTB/POZ and MATH domain-containing protein 1-like Neighboring gene uncharacterized LOC100843218 Neighboring gene hydroxycinnamoyltransferase 4-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    BTB/POZ and MATH domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      27690617..27692252 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010242254.2 → XP_010240556.1  BTB/POZ and MATH domain-containing protein 1

      UniProtKB/TrEMBL
      I1GW07
      Conserved Domains (4) summary
      smart00225
      Location:198 → 301
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd00121
      Location:18 → 160
      MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
      cd14736
      Location:301 → 361
      SPOP_C_like_plant; BACK-like Domain C-terminal to BTB in plant proteins similar to speckle-type POZ protein (SPOP)
      pfam00651
      Location:189 → 297
      BTB; BTB/POZ domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases