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    LOC100818326 DEAD-box ATP-dependent RNA helicase 37 [ Glycine max (soybean) ]

    Gene ID: 100818326, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100818326
    Gene description
    DEAD-box ATP-dependent RNA helicase 37
    Locus tag
    GLYMA_09G105300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100818326 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (19186292..19203098)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (19537547..19554398)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene fatty acyl-CoA reductase 2, chloroplastic Neighboring gene beta-glucuronosyltransferase GlcAT14B Neighboring gene serine/threonine-protein phosphatase PP2A-4 catalytic subunit Neighboring gene uncharacterized LOC102666397 Neighboring gene F-box protein At3g58530

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEAD-box ATP-dependent RNA helicase 37

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      19186292..19203098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003533858.5 → XP_003533906.1  DEAD-box ATP-dependent RNA helicase 37

      See identical proteins and their annotated locations for XP_003533906.1

      UniProtKB/TrEMBL
      K7LD23
      Conserved Domains (2) summary
      cd18787
      Location:383 → 519
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd17967
      Location:157 → 377
      DEADc_DDX3_DDX4; DEAD-box helicase domain of ATP-dependent RNA helicases DDX3 and DDX4

    2. XM_006587127.4 → XP_006587190.1  DEAD-box ATP-dependent RNA helicase 37

      See identical proteins and their annotated locations for XP_006587190.1

      UniProtKB/TrEMBL
      K7LD23
      Conserved Domains (2) summary
      cd18787
      Location:383 → 519
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd17967
      Location:157 → 377
      DEADc_DDX3_DDX4; DEAD-box helicase domain of ATP-dependent RNA helicases DDX3 and DDX4
    Nucleotide Protein
    Heading Accession and Version

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