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    LBD17 LBD domain-containing transcription factor [ Glycine max (soybean) ]

    Gene ID: 100812543, updated on 31-May-2023

    Summary

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    Gene symbol
    LBD17
    Gene description
    LBD domain-containing transcription factor
    Locus tag
    GLYMA_04G106400v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LBD17 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (11141490..11143401, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (11160071..11162075, complement)

    Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102659987 Neighboring gene uncharacterized LOC100782417 Neighboring gene heavy metal-associated isoprenylated plant protein 24 Neighboring gene uncharacterized LOC106798390

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Analysis of Soybean LATERAL ORGAN BOUNDARIES Domain-Containing Genes: A Functional Investigation of GmLBD12. Yang H, et al. Plant Genome, 2017 Mar. PMID 28464070

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOB domain-containing protein 36
    Names
    LOB domain-containing protein 36-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      11141490..11143401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006578275.4 → XP_006578338.1  LOB domain-containing protein 36

      See identical proteins and their annotated locations for XP_006578338.1

      UniProtKB/TrEMBL
      K7KJC7
      Conserved Domains (1) summary
      pfam03195
      Location:7 → 105
      LOB; Lateral organ boundaries (LOB) domain

    2. XM_006578274.4 → XP_006578337.1  LOB domain-containing protein 36

      See identical proteins and their annotated locations for XP_006578337.1

      UniProtKB/TrEMBL
      K7KJC7
      Conserved Domains (1) summary
      pfam03195
      Location:7 → 105
      LOB; Lateral organ boundaries (LOB) domain
    Nucleotide Protein
    Heading Accession and Version

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