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    LOC100811384 probable methyltransferase PMT20 [ Glycine max (soybean) ]

    Gene ID: 100811384, updated on 7-Dec-2023

    Summary

    Gene symbol
    LOC100811384
    Gene description
    probable methyltransferase PMT20
    Locus tag
    GLYMA_09G213100v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

    See LOC100811384 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (44551710..44556918, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (43683236..43688530, complement)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase F-4 Neighboring gene uncharacterized LOC102669120 Neighboring gene uncharacterized LOC100811917 Neighboring gene uncharacterized LOC100812465

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    probable methyltransferase PMT20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      44551710..44556918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003534265.4XP_003534313.1  probable methyltransferase PMT20

      See identical proteins and their annotated locations for XP_003534313.1

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    2. XM_014762318.3XP_014617804.1  probable methyltransferase PMT20

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    3. XM_006587571.4XP_006587634.1  probable methyltransferase PMT20

      See identical proteins and their annotated locations for XP_006587634.1

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    4. XM_041005097.1XP_040861031.1  probable methyltransferase PMT20

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase