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    GA3OX6 gibberellin 3-beta-dioxygenase 6 [ Glycine max (soybean) ]

    Gene ID: 100808546, updated on 7-Dec-2023

    Summary

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    Gene symbol
    GA3OX6
    Gene description
    gibberellin 3-beta-dioxygenase 6
    Locus tag
    GLYMA_17G205300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    GmGA3ox6
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    Genomic context

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    See GA3OX6 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (33240785..33243395)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (33370496..33373166)

    Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g11310, mitochondrial Neighboring gene protein TIFY 8-like Neighboring gene uncharacterized LOC121173806 Neighboring gene probable 2-oxoglutarate-dependent dioxygenase AOP1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of AtDREB1A causes a severe dwarf phenotype by decreasing endogenous gibberellin levels in soybean [Glycine max (L.) Merr]. Suo H, et al. PLoS One, 2012. PMID 23029105, Free PMC Article
    2. Evolutionary analysis of three gibberellin oxidase genes in rice, Arabidopsis, and soybean. Han F, et al. Gene, 2011 Feb 15. PMID 21056641
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gibberellin 3-beta-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to light stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gibberellin 3-beta-dioxygenase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      33240785..33243395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003550114.5 → XP_003550162.1  gibberellin 3-beta-dioxygenase 1

      UniProtKB/TrEMBL
      I1MWM9
      Conserved Domains (1) summary
      PLN02254
      Location:1 → 347
      PLN02254; gibberellin 3-beta-dioxygenase
    Nucleotide Protein
    Heading Accession and Version

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