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    LOC100805421 haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [ Glycine max (soybean) ]

    Gene ID: 100805421, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC100805421
    Gene description
    haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
    Locus tag
    GLYMA_11G040900v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100805421 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (2983303..2985530)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (2989340..2991605)

    Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene expansin-like B1 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene phosphatase YqaB-like Neighboring gene uncharacterized LOC100808080 Neighboring gene uncharacterized LOC100306202

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      2983303..2985530
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006590535.2 → XP_006590598.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY1
      Conserved Domains (1) summary
      cl21460
      Location:39 → 283
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_006590538.4 → XP_006590601.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      See identical proteins and their annotated locations for XP_006590601.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    3. XM_014763816.3 → XP_014619302.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X3

      UniProtKB/TrEMBL
      C6TCC0
      Conserved Domains (1) summary
      cl21460
      Location:25 → 269
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    4. XM_003539098.5 → XP_003539146.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      See identical proteins and their annotated locations for XP_003539146.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    5. XM_003539096.3 → XP_003539144.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      See identical proteins and their annotated locations for XP_003539144.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    6. XM_006590536.4 → XP_006590599.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2

      UniProtKB/TrEMBL
      C6TCC0
      Conserved Domains (1) summary
      cl21460
      Location:25 → 270
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    7. XM_006590534.2 → XP_006590597.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X5

      See identical proteins and their annotated locations for XP_006590597.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY0
      Conserved Domains (1) summary
      cl21460
      Location:39 → 284
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    8. XM_014763817.3 → XP_014619303.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    9. XM_014763818.3 → XP_014619304.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    10. XM_003539099.2 → XP_003539147.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      See identical proteins and their annotated locations for XP_003539147.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    11. XM_006590537.3 → XP_006590600.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      See identical proteins and their annotated locations for XP_006590600.1

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    12. XM_014763819.2 → XP_014619305.1  haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X4

      UniProtKB/TrEMBL
      C6TCC0, I1LGY5
      Conserved Domains (1) summary
      cl21460
      Location:2 → 233
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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