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    LOC100803518 YfcA domain-containing protein [ Glycine max (soybean) ]

    Gene ID: 100803518, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100803518
    Gene description
    YfcA domain-containing protein
    Locus tag
    GLYMA_07G186600v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100803518 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (35763005..35766139)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (35405036..35408170)

    Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene pathogenesis-related protein 1A Neighboring gene pathogenesis-related protein 1-like Neighboring gene kinesin-like protein KIN-14C Neighboring gene uncharacterized LOC100780858

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul4A-RING E3 ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Sulfite exporter TauE/SafE family protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001255720.3 → NP_001242649.2  Sulfite exporter TauE/SafE family protein 2-like precursor

      Status: VALIDATED

      Source sequence(s)
      ACUP04002728
      UniProtKB/TrEMBL
      C6TA38, I1KLA0
      Conserved Domains (1) summary
      cl21514
      Location:357 → 441
      TauE; Sulfite exporter TauE/SafE

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      35763005..35766139
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases