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    Polm DNA polymerase mu [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100762233, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Polm
    Gene description
    DNA polymerase mu
    See related
    Ensembl:ENSCGRG00015004497
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Polm in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614085.1 (315726..325928, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (98993559..99003916)

    NW_003614085.1Genomic Context describing neighboring genes Neighboring gene drebrin like Neighboring gene phosphoglycerate mutase 2 Neighboring gene uncharacterized LOC118239671 Neighboring gene uncharacterized LOC113832393 Neighboring gene AE binding protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via nonhomologous end joining IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed DNA/RNA polymerase mu
    Names
    polymerase (DNA directed), mu
    polymerase (DNA) mu

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614085.1 Reference CriGri_1.0 Primary Assembly

      Range
      315726..325928 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007645260.4 → XP_007643450.1  DNA-directed DNA/RNA polymerase mu isoform X2

      See identical proteins and their annotated locations for XP_007643450.1

      UniProtKB/TrEMBL
      A0A061IPE9, A0A9J7J281
      Conserved Domains (2) summary
      cd00141
      Location:85 → 421
      NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
      smart00483
      Location:81 → 422
      POLXc; DNA polymerase X family

    2. XM_003504749.5 → XP_003504797.1  DNA-directed DNA/RNA polymerase mu isoform X1

      See identical proteins and their annotated locations for XP_003504797.1

      UniProtKB/TrEMBL
      A0A061IPE9, G3HMA0
      Conserved Domains (3) summary
      cd00141
      Location:153 → 489
      NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
      smart00483
      Location:149 → 490
      POLXc; DNA polymerase X family
      cd00027
      Location:27 → 106
      BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...

    3. XM_007645261.4 → XP_007643451.1  DNA-directed DNA/RNA polymerase mu isoform X2

      See identical proteins and their annotated locations for XP_007643451.1

      UniProtKB/TrEMBL
      A0A061IPE9, A0A9J7J281
      Conserved Domains (2) summary
      cd00141
      Location:85 → 421
      NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
      smart00483
      Location:81 → 422
      POLXc; DNA polymerase X family

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276807.1 Alternate CriGri-PICRH-1.0

      Range
      98993559..99003916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027388194.2 → XP_027243995.1  DNA-directed DNA/RNA polymerase mu isoform X2

      UniProtKB/TrEMBL
      A0A061IPE9, A0A9J7J281

    2. XM_027388193.2 → XP_027243994.1  DNA-directed DNA/RNA polymerase mu isoform X1

      UniProtKB/TrEMBL
      A0A061IPE9, A0A9J7J4J8
      Related
      ENSCGRP00015005825.2, ENSCGRT00015007194.2

    3. XM_027388195.2 → XP_027243996.1  DNA-directed DNA/RNA polymerase mu isoform X2

      UniProtKB/TrEMBL
      A0A061IPE9, A0A9J7J281
    Nucleotide Protein Strain
    Heading Accession and Version

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