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    Syt1 synaptotagmin 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100753843, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Syt1
    Gene description
    synaptotagmin 1
    See related
    Ensembl:ENSCGRG00015010552
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Syt1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614534.1 (53305..252519)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (146549209..146749084)

    NW_003614534.1Genomic Context describing neighboring genes Neighboring gene lys-63-specific deubiquitinase BRCC36 Neighboring gene SCY1-like protein 2 Neighboring gene histone H2A.Z-like Neighboring gene pro-apoptotic WT1 regulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dense core granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-1
    Names
    Synaptotagmin-1
    synaptotagmin I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614534.1 Reference CriGri_1.0 Primary Assembly

      Range
      53305..252519
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003508384.4 → XP_003508432.1  synaptotagmin-1 isoform X1

      See identical proteins and their annotated locations for XP_003508432.1

      UniProtKB/TrEMBL
      G3HZ13
      Conserved Domains (3) summary
      cd08385
      Location:143 → 265
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:274 → 409
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    2. XM_007649021.3 → XP_007647211.1  synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A9J7H9J1
      Conserved Domains (3) summary
      cd08385
      Location:140 → 262
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:271 → 406
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276806.1 Alternate CriGri-PICRH-1.0

      Range
      146549209..146749084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035451860.1 → XP_035307751.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      G3HZ13
      Related
      ENSCGRP00015013743.1, ENSCGRT00015016826.2
      Conserved Domains (3) summary
      cd08385
      Location:143 → 265
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:274 → 409
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    2. XM_035451861.1 → XP_035307752.1  synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A9J7H9J1
      Conserved Domains (3) summary
      cd08385
      Location:140 → 262
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:271 → 406
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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