U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Pla2g6 phospholipase A2 group VI [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100751421, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Pla2g6
    Gene description
    phospholipase A2 group VI
    Locus tag
    I79_024340
    See related
    Ensembl:ENSCGRG00015002664
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Pla2g6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617169.1 (4664..32589, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (376400837..376496719, complement)

    NW_003617169.1Genomic Context describing neighboring genes Neighboring gene brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-independent phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cardiolipin acyl-chain remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    85/88 kDa calcium-independent phospholipase A2
    Names
    85 kDa calcium-independent phospholipase A2
    phospholipase A2, group VI (cytosolic, calcium-independent)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003617169.1 Reference CriGri_1.0 Primary Assembly

      Range
      4664..32589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007654979.3 → XP_007653169.3  85/88 kDa calcium-independent phospholipase A2 isoform X1

      UniProtKB/TrEMBL
      A0A9J7JVB5
      Conserved Domains (4) summary
      cd07212
      Location:426 → 739
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_027385880.2 → XP_027241681.2  85/88 kDa calcium-independent phospholipase A2 isoform X2

      UniProtKB/Swiss-Prot
      A0A384E119, A0A3L7I2I8
      UniProtKB/TrEMBL
      A0A9J7FGH3
      Conserved Domains (5) summary
      cd07212
      Location:481 → 794
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      PTZ00322
      Location:333 → 436
      PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048595.1 Alternate CriGri-PICRH-1.0

      Range
      376400837..376496719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027403992.2 → XP_027259793.1  85/88 kDa calcium-independent phospholipase A2 isoform X4

      UniProtKB/Swiss-Prot
      A0A384E119, A0A3L7I2I8
      UniProtKB/TrEMBL
      A0A9J7FGH3
      Related
      ENSCGRP00015003537.1, ENSCGRT00015004370.2
      Conserved Domains (5) summary
      cd07212
      Location:481 → 794
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      PTZ00322
      Location:333 → 436
      PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_027403995.2 → XP_027259796.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

      UniProtKB/TrEMBL
      A0A9J7JVB5
      Related
      ENSCGRP00015003466.1, ENSCGRT00015004287.2
      Conserved Domains (4) summary
      cd07212
      Location:426 → 739
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_035440763.1 → XP_035296654.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

      UniProtKB/TrEMBL
      A0A9J7JVB5
      Conserved Domains (4) summary
      cd07212
      Location:426 → 739
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_035440762.1 → XP_035296653.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

      UniProtKB/TrEMBL
      A0A9J7JVB5
      Conserved Domains (4) summary
      cd07212
      Location:426 → 739
      Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
      sd00045
      Location:286 → 314
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:291 → 380
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:120 → 183
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.