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    Tes testin LIM domain protein [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100751144, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tes
    Gene description
    testin LIM domain protein
    See related
    Ensembl:ENSCGRG00015026389
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    Testin
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See Tes in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613810.1 (394157..432725)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (209445347..209473691, complement)

    NW_003613810.1Genomic Context describing neighboring genes Neighboring gene transcription factor EC Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103160985

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: testin; testin
    Names
    testis derived transcript (3 LIM domains)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613810.1 Reference CriGri_1.0 Primary Assembly

      Range
      394157..432725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003500772.5 → XP_003500820.1  testin isoform X1

      See identical proteins and their annotated locations for XP_003500820.1

      UniProtKB/TrEMBL
      G3H9I6
      Conserved Domains (4) summary
      cd09413
      Location:229 → 286
      LIM1_Testin; The first LIM domain of Testin
      cd09416
      Location:292 → 347
      LIM2_Testin; The second LIM domain of Testin
      cd09419
      Location:354 → 412
      LIM3_Testin; The third LIM domain of Testin
      cd09829
      Location:109 → 195
      PET_testin; The PET domain of Testin

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276806.1 Alternate CriGri-PICRH-1.0

      Range
      209445347..209473691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035451398.1 → XP_035307289.1  LOW QUALITY PROTEIN: testin isoform X2

      UniProtKB/TrEMBL
      A0A9J7KEE1
      Related
      ENSCGRP00015035147.1, ENSCGRT00015042816.2
      Conserved Domains (4) summary
      cd09413
      Location:263 → 320
      LIM1_Testin; The first LIM domain of Testin
      cd09416
      Location:326 → 381
      LIM2_Testin; The second LIM domain of Testin
      cd09419
      Location:388 → 446
      LIM3_Testin; The third LIM domain of Testin
      cd09829
      Location:143 → 229
      PET_testin; The PET domain of Testin
    Nucleotide Protein Strain
    Heading Accession and Version

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