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    Samd5 sterile alpha motif domain containing 5 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100723711, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Samd5
    Gene description
    sterile alpha motif domain containing 5
    See related
    Ensembl:ENSCPOG00000036984
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Samd5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947505.1 (34582696..34629056, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176359.1 (2616955..2658866, complement)

    NW_026947505.1Genomic Context describing neighboring genes Neighboring gene SAM and SH3 domain containing 1 Neighboring gene uncharacterized LOC111755784 Neighboring gene uncharacterized LOC134472105 Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene syntaxin binding protein 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sterile alpha motif domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947505.1 Reference mCavPor4.1

      Range
      34582696..34629056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003466358.4 → XP_003466406.1  sterile alpha motif domain-containing protein 5

      UniProtKB/TrEMBL
      A0A286XXY8
      Related
      ENSCPOP00000030437.1
      Conserved Domains (2) summary
      cd09527
      Location:2 → 64
      SAM_Samd5; SAM domain of Samd5 subfamily
      smart00454
      Location:6 → 65
      SAM; Sterile alpha motif
    Nucleotide Protein
    Heading Accession and Version

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