U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SLCO5A1 solute carrier organic anion transporter family member 5A1 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100618820, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SLCO5A1
    Gene description
    solute carrier organic anion transporter family member 5A1
    See related
    EnsemblRapid:ENSMODG00000007415
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLCO5A1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (320440212..320863567, complement)
    103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (166938178..167350644)

    Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103099480 Neighboring gene sulfatase 1 Neighboring gene uncharacterized LOC103097567 Neighboring gene NEDD4-binding protein 2-like 2 Neighboring gene PR/SET domain 14

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium-independent organic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium-independent organic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    solute carrier organic anion transporter family member 5A1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077229.1 Reference mMonDom1.pri

      Range
      320440212..320863567 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016431474.2 → XP_016286960.1  solute carrier organic anion transporter family member 5A1

      UniProtKB/TrEMBL
      A0A5F8H2M3, F7GKH7
      Conserved Domains (3) summary
      cd06174
      Location:162 → 560
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd01330
      Location:580 → 634
      KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
      pfam03137
      Location:157 → 763
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    2. XM_056824047.1 → XP_056680025.1  solute carrier organic anion transporter family member 5A1

      UniProtKB/TrEMBL
      A0A5F8H2M3, F7GKH7
      Related
      ENSMODP00000009199.4, ENSMODT00000009380.5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.